skills/cognitedata/dune-skills/setup-python-tools

setup-python-tools

Installation
SKILL.md

Set Up Python Tool Execution

Add client-side Python tool execution via Pyodide to this Dune app.

Target: $ARGUMENTS

Background

Atlas agents can have Python tools defined in their CDF config (type: "runPythonCode"). When the agent calls one, it arrives as a toolConfirmation (auto-allowed) followed by a clientTool action. The library fetches the tool's Python code from the agent config automatically and executes it via the provided pythonRuntime.

You only need to:

  1. Set up usePyodideRuntime to get a runtime instance
  2. Pass pythonRuntime to useAtlasChat

No PythonToolConfig entries — the library reads the code from the agent's CDF config.

The flow is:

  1. usePyodideRuntime loads Pyodide (~30MB, cached after first load), installs packages, and injects Cognite SDK credentials into the Python environment
  2. When the agent calls a Python tool, the library fetches its code from the agent's CDF config (cached per session), wraps it, executes it in Pyodide, and returns the result

Step 1 — Understand the app

Read these files before touching anything:

  • package.json — detect package manager and existing deps
  • The component that calls useAtlasChat — understand current tools/config

Step 2 — Install Pyodide

Install exactly pyodide@0.29.3 using the app's package manager. This version must match the CDN artifacts loaded at runtime — installing a different version will cause errors.

  • pnpm → pnpm add pyodide@0.29.3
  • npm → npm install pyodide@0.29.3
  • yarn → yarn add pyodide@0.29.3

Note: @cognite/dune-industrial-components, @sinclair/typebox, ajv, ajv-formats should already be installed. If not, install them too (see the integrate-atlas-chat skill).


Step 3 — Set up usePyodideRuntime

In the component that calls useAtlasChat, add the Pyodide runtime hook:

import { loadPyodide } from "pyodide";
import { usePyodideRuntime } from "@cognite/dune-industrial-components/atlas-agent/pyodide";
import { useAtlasChat } from "@cognite/dune-industrial-components/atlas-agent/react";

function MyChat() {
  const { sdk, isLoading } = useDune();

  // Initialize Python runtime (loads Pyodide, installs packages, sets up Cognite SDK)
  const {
    runtime: pythonRuntime,
    loading: pythonLoading,
    progress: pythonProgress,
    error: pythonError,
    isReady: pythonReady,
  } = usePyodideRuntime({
    loadPyodide,
    client: isLoading ? null : sdk,
    requirements: ["pandas", "numpy"],    // optional — additional packages
  });

  // ... useAtlasChat below
}

Hook API reference

Return field Type Description
runtime PythonRuntime | undefined The initialized runtime, or undefined if not ready
loading boolean True while Pyodide is loading / initializing
error string | null Error message if initialization failed
progress { stage: string; percent: number } Current init progress for UI display
isReady boolean Convenience: !loading && !error && runtime !== undefined

Loading state UI

Place the loading indicator above the chat input, not in the message list. Keep it compact — a pill/badge showing stage text and percent. Show an error badge separately. First load is ~30-60s (downloads ~30MB); subsequent loads are <2s from browser cache.

{/* Loading — shown above the input while Pyodide initializes */}
{pythonLoading && (
  <div className="flex items-center gap-2 rounded-lg border bg-muted/50 px-3 py-2 text-sm text-muted-foreground">
    {/* Optional: <IconBrandPython /> from @tabler/icons-react */}
    <span>{pythonProgress.stage || "Initializing Python..."}</span>
    {pythonProgress.percent > 0 && pythonProgress.percent < 100 && (
      <span className="text-xs opacity-70">({pythonProgress.percent}%)</span>
    )}
  </div>
)}

{/* Error — shown if init fails (after loading finishes) */}
{pythonError && !pythonLoading && (
  <div className="flex items-center gap-2 rounded-lg border border-destructive/30 bg-destructive/10 px-3 py-2 text-sm text-destructive">
    <span>Python runtime failed to load</span>
  </div>
)}

Step 4 — Wire into useAtlasChat

Pass the runtime to useAtlasChat. That's all — no tool configs needed:

const { messages, send, isStreaming, progress, error, reset, abort } = useAtlasChat({
  client: isLoading ? null : sdk,
  agentExternalId: "my-agent",
  tools: [renderTimeSeries],   // regular client tools (declared to agent), if any
  pythonRuntime,               // from usePyodideRuntime — enables Python tool execution
});

Note: Python tools are NOT declared to the agent via tools. The agent already knows about them from its CDF config. The library fetches the code automatically when needed.


Step 5 — Disable input while Python loads

The user shouldn't send messages before the runtime is ready. Disable the entire input area (not just the send button) so the state is unambiguous:

<ChatInput
  onSend={handleSend}
  disabled={isStreaming || pythonLoading}
  // ...
/>

If you have a home page with suggestion chips, disable those too:

<ChatHomePage
  onSuggestionClick={handleSuggestionClick}
  disabled={pythonLoading}
/>

Done

The app can now execute Python tools client-side via Pyodide. When the agent calls a Python tool, the library automatically fetches its code from the agent config, runs it in the browser, and returns the result to the agent.

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