deeptools
Pass
Audited by Gen Agent Trust Hub on Feb 17, 2026
Risk Level: SAFE
Full Analysis
- [COMMAND_EXECUTION] (SAFE): Documentation in
references/effective_genome_sizes.mdandassets/quick_reference.mdcontains shell command examples for bioinformatics tools (e.g.,bamCoverage,multiBamSummary). These are intended for educational reference and are not executed by the skill. - [DATA_EXPOSURE] (SAFE): The
scripts/validate_files.pyscript reads local file paths to verify their existence and format. It does not access sensitive system directories, credentials, or personal data. - [REMOTE_CODE_EXECUTION] (SAFE): No remote code execution patterns or external script downloads were detected. The Python script uses only standard libraries (
os,sys,argparse,pathlib). - [EXTERNAL_DOWNLOADS] (SAFE): External links in the documentation point to standard, reputable bioinformatics resources such as ReadTheDocs and ENCODE.
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