The Agent Skills Directory

[DATA_OPERATIONS] (SAFE): Documentation describes standard platform operations for file and record management including secure upload/download procedures.
[COMMAND_EXECUTION] (SAFE): Provides examples for running external bioinformatics tools via subprocess.check_call, which is consistent with the primary purpose of the platform.
[CREDENTIALS_UNSAFE] (SAFE): Authentication examples use clear placeholders (e.g., 'YOUR_API_TOKEN') rather than hardcoded secrets.
[INDIRECT_PROMPT_INJECTION] (LOW): Although the documentation describes processing external data like FASTQ files, this is an inherent platform feature for bioinformatics; no specific vulnerabilities or malicious instructions are introduced in the skill content itself.

dnanexus-integration