bio-pathway-reactome
Pass
Audited by Gen Agent Trust Hub on Feb 17, 2026
Risk Level: SAFE
Full Analysis
- Indirect Prompt Injection (LOW): The skill processes external data from a CSV file (
de_results.csv) which could theoretically contain malicious instructions. - Ingestion points:
read.csv('de_results.csv')in the 'Prepare Gene List' section. - Boundary markers: None present in the code snippets.
- Capability inventory: File system read/write (
read.csv,write.csv), R environment code execution, and potential browser interaction viaviewPathway. - Sanitization: No explicit sanitization or validation of the input CSV content is shown before processing.
- External Dependencies (SAFE): The skill relies on Bioconductor packages (
ReactomePA,clusterProfiler,enrichplot) and organism-specific annotation databases. While these are external, they are standard libraries within the bioinformatics domain. - Data Handling (SAFE): The skill performs local data processing. No evidence of credential exposure or exfiltration to unauthorized external domains was found.
Audit Metadata