bio-read-alignment-bowtie2-alignment
Pass
Audited by Gen Agent Trust Hub on Feb 17, 2026
Risk Level: SAFE
Full Analysis
- [Prompt Injection] (SAFE): No instructions attempting to override agent behavior or bypass safety guidelines were found.
- [Data Exposure & Exfiltration] (SAFE): No hardcoded credentials, sensitive file path access, or unauthorized network operations were detected.
- [Obfuscation] (SAFE): No hidden or encoded content (Base64, zero-width characters, etc.) was found.
- [Unverifiable Dependencies & Remote Code Execution] (SAFE): No remote scripts or packages are downloaded or executed at runtime. The skill references standard bioinformatics CLI tools.
- [Indirect Prompt Injection] (LOW):
- Ingestion points: Reads biological data from local FASTQ and FASTA files.
- Boundary markers: None explicitly defined in the provided snippets.
- Capability inventory: Executes local shell commands for alignment and sorting.
- Sanitization: None specified for input file contents, but the data processed (genomic sequences) is unlikely to contain executable instructions for the agent.
Audit Metadata