bio-workflow-management-snakemake-workflows

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Audited by Snyk on Feb 16, 2026

Risk Level: MEDIUM
Full Analysis

MEDIUM W012: Unverifiable external dependency detected (runtime URL that controls agent).

  • Potentially malicious external URL detected (high risk: 0.80). The Snakefile specifies a runtime container image "docker://biocontainers/bwa:v0.7.17", which Snakemake will fetch and run at workflow execution time and thus can execute remote code from that external image.
Audit Metadata
Risk Level
MEDIUM
Analyzed
Feb 16, 2026, 01:24 AM