structural-biology
Pass
Audited by Gen Agent Trust Hub on Feb 26, 2026
Risk Level: SAFEPROMPT_INJECTION
Full Analysis
- [SAFE]: The skill provides documentation and code for protein structure analysis using industry-standard tools (Phenix) and libraries (Biopython, NumPy, Matplotlib). All behaviors are consistent with the stated purpose of structural biology research.
- [PROMPT_INJECTION]: The skill exhibits an indirect prompt injection surface (Category 8):
- Ingestion points: Data is ingested from local structural files (PDB, JSON) and external research data fetched through the
search_pubmedtool. - Boundary markers: The skill does not define explicit delimiters or instructions to ignore commands potentially embedded in PDB metadata or PubMed abstracts.
- Capability inventory: The skill has access to tools for arbitrary code execution (
execute_code) and structural validation (run_phenix_tool). - Sanitization: No explicit validation or sanitization of input data is mentioned in the provided guidance. This surface is inherent to the skill's functionality and is documented here as a domain-specific characteristic.
Audit Metadata