Sync Skills Manager

Manage synchronization between repository skills and local/system skill directories.

Scripts

sync-skills.sh (canonical manager)

Sync between repository-canonical categories and runtime installs (~/.claude/skills + other agents).

Command	Description
./sync-skills.sh diff	Preview system-only skills
./sync-skills.sh pull	Sync ~/.claude/skills -> repo (add new skills)
./sync-skills.sh push	Sync repo -> ~/.claude/skills and refresh agent links
./sync-skills.sh link-all	Rebuild other agent dirs as symlinks to ~/.claude/skills
./sync-skills.sh dedupe	Remove duplicate entries from ~/.gemini/skills
./sync-skills.sh status	Show sync status

sync-skills-3way.sh (recommended)

Incremental 3-way sync across:

• ~/.codex/skills (including .system)
• ~/.claude/skills (canonical)
• repository skills tree

Key behavior:

• Incremental only (rsync --update), never deletes files.
• New skills missing in repo are added to tools-skills/ by default (or legacy system-skills/tools-skills/ if present).
• For duplicate skill names in repo, the newest SKILL.md copy is treated as canonical for repo -> local sync.

Command	Description
./sync-skills-3way.sh sync	Run 3-way incremental sync (default)
./sync-skills-3way.sh status	Show counts and name-level diffs
./sync-skills-3way.sh help	Show usage

scripts/skills_profiles.py (profiles manager)

Manage which skills are enabled per agent by creating/removing symlinks that point to the canonical registry (~/.claude/skills).

This solves two common issues:

• New skills created/edited in one tool (e.g. Codex) not showing up in others (e.g. Cursor).
• Too many skills loaded everywhere (context bloat) while still keeping one global registry.

Config

• Default config file: system-skills/sync-skills-manager/skills-profiles.json

Safety model

• apply and normalize default to dry-run. Use --apply to change files.
• Only “managed skills” are modified: a directory in the registry that contains SKILL.md.
• Non-skill folders (no SKILL.md, e.g. dist/) are treated as unmanaged and never touched.
• normalize always moves existing entries into a backup folder before replacing them with symlinks.

Commands

# Show registry + per-agent status
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py status

# Preview what would change (desired vs current)
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py diff

# 1) Sync Codex/registry/repo (incremental, no delete)
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py sync

# 2) Normalize drift (copies/non-canonical links -> canonical symlinks, with backups)
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py normalize --dry-run
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py normalize --apply

# 3) Apply enable/disable sets (remove extra canonical links, add missing links)
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py apply --dry-run
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py apply --apply

# One-shot daily workflow (sync -> normalize -> apply)
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py refresh --apply

# Manage by star ratings (1-7)
# Keep only 7-star skills (other agents). claude-code registry itself is skipped.
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py stars --mode only --stars 7 --dry-run
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py stars --mode only --stars 7 --apply

# Batch install by stars (e.g. add 6-star and 5-star)
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py stars --mode install --stars 6,5 --apply

# Batch uninstall by stars
python3 system-skills/sync-skills-manager/scripts/skills_profiles.py stars --mode uninstall --stars 5 --apply

Backups

• Default backup root: ~/.claude/skills-backups/<timestamp>/<agent>/<skill>/...

Tests

python3 -m unittest -q

scripts/agent_skills_audit.py (agent installation + diff auditor)

Check which supported agents are installed locally, list recognized skills, and diff skill sets between agents.

# Scan all supported agents
python3 system-skills/sync-skills-manager/scripts/agent_skills_audit.py scan

# Only installed agents, with skills preview
python3 system-skills/sync-skills-manager/scripts/agent_skills_audit.py scan --installed-only --with-skills

# List full skills for selected agents
python3 system-skills/sync-skills-manager/scripts/agent_skills_audit.py skills --installed-only --agent codex,cursor

# Diff codex vs cursor
python3 system-skills/sync-skills-manager/scripts/agent_skills_audit.py diff --left codex --right cursor

# Diff one baseline against multiple agents
python3 system-skills/sync-skills-manager/scripts/agent_skills_audit.py diff --left codex --right cursor,amp,claude-code

# Sync check: compare installed agents against canonical claude-code
python3 system-skills/sync-skills-manager/scripts/agent_skills_audit.py sync-check --canonical-agent claude-code --installed-only

# Sync check for selected agents
python3 system-skills/sync-skills-manager/scripts/agent_skills_audit.py sync-check --canonical-agent claude-code --agent codex,cursor,amp

scripts/reclassify_system_skills.py (category rebalancer)

Rebalance system-skills category distribution (defaults to reclassifying tools-skills into domain categories).

# Preview reclassification plan
python3 system-skills/sync-skills-manager/scripts/reclassify_system_skills.py --from-category tools-skills

# Apply reclassification
python3 system-skills/sync-skills-manager/scripts/reclassify_system_skills.py --from-category tools-skills --apply

scripts/flatten_system_skills_layout.py (layout simplifier)

Flatten legacy system-skills/<category>/<skill> into repo-root <category>/<skill> while preserving system-skills/sync-skills-manager/.

# Preview flatten/migration actions
python3 system-skills/sync-skills-manager/scripts/flatten_system_skills_layout.py

# Apply migration actions
python3 system-skills/sync-skills-manager/scripts/flatten_system_skills_layout.py --apply

Usage

Daily 3-way sync

./sync-skills-3way.sh sync

Quick status check

./sync-skills-3way.sh status

Configuration

sync-skills.sh uses sync-config.json:

{
  "system_skills_path": "~/.claude/skills",
  "repo_skills_path": "./",
  "exclude_patterns": ["sync-skills-manager"],
  "sync_mode": "incremental",
  "default_command": "diff"
}