The Agent Skills Directory

[COMMAND_EXECUTION] (SAFE): The scripts are standalone Python tools for processing tree data. They do not execute arbitrary shell commands or spawn subprocesses.
[DATA_EXFILTRATION] (SAFE): File access is restricted to reading input trees/taxa and writing output files as explicitly defined by command-line arguments. No hardcoded credentials or external network exfiltration patterns were detected.
[EXTERNAL_DOWNLOADS] (SAFE): The scripts require the 'ete3' library, which is a reputable package in the bioinformatics ecosystem. No automated or hidden downloads of untrusted code occur at runtime.

etetoolkit