tooluniverse-gene-enrichment
Pass
Audited by Gen Agent Trust Hub on Mar 29, 2026
Risk Level: SAFE
Full Analysis
- [SAFE]: The skill implements legitimate scientific workflows for gene set enrichment analysis (ORA and GSEA) using well-established libraries such as gseapy, pandas, numpy, and statsmodels. It interacts with reputable bioinformatics services including Enrichr, PANTHER, STRING, and Reactome.
- [DATA_EXFILTRATION]: The skill communicates with several external bioinformatics APIs to perform functional annotation and pathway analysis. These network operations are essential to the skill's purpose and target recognized academic and research infrastructure. Data transmitted is limited to gene identifiers required for analysis.
- [COMMAND_EXECUTION]: The skill performs file system operations to generate and progressively populate markdown reports. These operations use relative paths and standard Python file handling, posing no risk of unauthorized system access.
- [CREDENTIALS_UNSAFE]: The skill includes a .env.template file with placeholders for various scientific API keys. This facilitates secure local configuration by the user, adhering to industry standards for secret management.
Audit Metadata