The Agent Skills Directory

External Resource Integration: The skill provides instructions for installing dependencies from well-known repositories, such as PyTorch's official distribution site and the model hub on HuggingFace. These resources are standard for deep learning workflows in genomics and facilitate the setup of the necessary computational environment.
Data Ingestion Surface: The skill includes an attack surface for indirect prompt injection by ingesting data through functions like sc.read_h5ad and md.read across various scripts and reference files. While there are no explicit boundary markers to delimit untrusted content, the skill's capabilities are appropriately scoped to local file operations and biological data processing. Data integrity is addressed through standard quality control (QC) filtering steps.

scvi-tools