pubmed-database
Audited by Runlayer on Feb 22, 2026
Malicious tool definition detected
Tool: SKILL.md [1/3] Description: --- name: pubmed-database description: "Direct REST API access to PubMed.
Tool: SKILL.md [2/3] Description: Use Advanced Search to view query translation 5. Combine search history for complex queries **When to consult common_queries.md**: - Need example queries for specific disease types or research areas - Require templates for different study designs - Looking for population-specific query patterns (pediatric, geriatric, etc.) - Constructing methodology-specific searches - Need quality filters or best practice patterns Grep pattern for query examples: `diabetes|canc
Tool: SKILL.md [3/3]
Malicious tool definition detected
Tool: references/api_reference.md [1/2] Description: # PubMed E-utilities API Reference ## Overview The NCBI E-utilities provide programmatic access to PubMed and other Entrez databases through a REST API.
Tool: references/api_reference.md [2/2]
Malicious tool definition detected
Tool: references/common_queries.md [1/2]
Tool: references/common_queries.md [2/2] Description: genetic testing[tiab]) AND clinical application[tiab] AND 2020:2024[dp] ``` ### Translational Research ``` (basic science[tiab] OR bench to bedside[tiab] OR translational medical research[mh]) AND disease[tiab] AND (clinical trial[pt] OR clinical application[tiab]) AND 2020:2024[dp] ``` ## Quality Filters ### High-Quality Evidence ``` condition[tiab] AND (randomized controlled trial[pt] OR systematic review[pt] OR meta-analysis[pt]) AND human
Malicious tool definition detected
Tool: references/search_syntax.md [1/2] Description: # PubMed Search Syntax and Field Tags ## Boolean Operators PubMed supports standard Boolean operators to combine search terms: ### AND Retrieves results containing all search terms.
Tool: references/search_syntax.md [2/2] Description: - Adolescent (13-18 years) - Adult (19+ years) - Aged (65+ years) - 80 and over ### Languages - English - Spanish - French - German - Chinese - And many others ### Other Filters - Journal categories - Subject area - Article attributes (e.g., has abstract, free PMC article) ## Advanced Search Strategies ### Clinical Queries PubMed provides specialized filters for clinical research: **Study Categories**: - Therapy (narrow/broad) - Diagnosis (nar