Token Efficiency Expert

This skill provides token optimization strategies for cost-effective Claude Code usage across all projects. These guidelines help minimize token consumption while maintaining high-quality assistance.

Core Principle

ALWAYS follow these optimization guidelines by default unless the user explicitly requests verbose output or full file contents.

Default assumption: Users prefer efficient, cost-effective assistance.

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Model Selection Strategy

Use the right model for the task to optimize cost and performance:

Opus - For Learning and Deep Understanding

Use Opus when:

• Learning new codebases - Understanding architecture, code structure, design patterns
• Broad exploration - Identifying key files, understanding repository organization
• Deep analysis - Analyzing complex algorithms, performance optimization
• Reading and understanding - When you need to comprehend existing code before making changes
• Very complex debugging - Only when Sonnet can't solve it or issue is architectural

Sonnet - For Regular Development Tasks (DEFAULT)

Use Sonnet (default) for:

• Writing code, editing and fixing, debugging, testing, documentation, deployment, general questions

Typical session pattern:

1. Start with Opus - Spend 10-15 minutes understanding the codebase (one-time investment)
2. Switch to Sonnet - Use for ALL implementation, debugging, and routine work
3. Return to Opus - Only when explicitly needed for deep architectural understanding

Savings: ~50% token cost vs all-Opus usage.

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Skills and Token Efficiency

Myth: Having many skills in .claude/skills/ increases token usage.

Reality: Skills use progressive disclosure - Claude sees only skill descriptions at session start (~155 tokens for 4 skills). Full skill content loaded only when activated.

It's safe to symlink multiple skills to a project. Token waste comes from reading large files unnecessarily, not from having skills available.

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Token Optimization Rules (Quick Reference)

1. Use Quiet/Minimal Output Modes

Use --quiet, -q, --silent flags by default. Only use verbose when user explicitly asks.

2. NEVER Read Entire Log Files

Always filter before reading: tail -100, grep -i "error", specific time ranges.

3. Check Lightweight Sources First

Check git status --short, package.json, requirements.txt before reading large files.

4. Use Grep Instead of Reading Files

Search for specific content with Grep tool instead of reading entire files.

5. Read Files with Limits

Use offset and limit parameters. Check file size with wc -l first.

6. Use Bash Commands Instead of Reading Files

CRITICAL OPTIMIZATION. Reading files costs tokens. Bash commands don't.

Operation	Wasteful	Efficient
Copy file	Read + Write	cp source dest
Replace text	Read + Edit	sed -i '' 's/old/new/g' file
Append	Read + Write	echo "text" >> file
Delete lines	Read + Write	sed -i '' '/pattern/d' file
Merge files	Read + Read + Write	cat file1 file2 > combined
Count lines	Read file	wc -l file
Check content	Read file	grep -q "term" file

When to break this rule: Complex logic, code-aware changes, validation needed, interactive review. For details, see strategies.md.

7. Filter Command Output

Limit scope: head -50, find . -maxdepth 2, tree -L 2.

8. Summarize, Don't Dump

Provide structured summaries of directory contents, code structure, command output.

9. Use Head/Tail for Large Output

head -100, tail -50, sample from middle with head -500 | tail -100.

10. Use JSON/Data Tools Efficiently

Extract specific fields: jq '.metadata', jq 'keys'. For CSV: head -20, wc -l.

11. Optimize Code Reading

Get overview first (find, grep for classes/functions), read structure only, search for specific code, read only relevant sections.

12. Use Task Tool for Exploratory Searches

Use Task/Explore subagent for broad codebase exploration. Saves 70-80% tokens vs direct multi-file exploration.

13. Efficient Scientific Literature Searches

Batch 3-5 related searches in parallel. Save results immediately. Document "not found" items.

For detailed strategies, bash patterns, and extensive examples, see strategies.md.

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Decision Tree for File Operations

Ask yourself:

1. Creating new file? -> Write tool
2. Low-cost operation (< 100 lines output)? -> Use Claude context directly
3. Modifying code file (.py, .js, .xml)? -> Read + Edit (always)
4. Modifying small data file (< 100 lines)? -> Read + Edit is fine
5. Modifying critical data (genome stats, enriched tables)? -> bash + log file
6. Modifying large data file? -> sed/awk
7. Copying/moving files? -> cp/mv

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When to Override These Guidelines

Override efficiency rules when:

1. User explicitly requests full output ("Show me the entire log file")
2. Filtered output lacks necessary context (error references missing line numbers)
3. File is known to be small (< 200 lines)
4. Learning code structure and architecture - Prioritize understanding over efficiency

In learning mode:

• Read 2-5 key files fully to establish understanding
• Use grep to find other relevant examples
• Summarize patterns found across many files
• After learning phase, return to efficient mode for implementation
• For detailed learning mode strategies, see learning-mode.md

In cases 1-3, explain token cost to user and offer filtered view first.

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Quick Reference Card

Model Selection (First Priority):

• Learning/Understanding -> Use Opus
• Development/Debugging/Implementation -> Use Sonnet (default)

Before ANY file operation, ask yourself:

1. Am I creating a NEW file? -> Write tool directly
2. Is this a LOW-COST operation? (< 100 lines) -> Use Claude context directly
3. Am I modifying a CODE file? -> Read + Edit (always)
4. Am I modifying a SMALL data file? (< 100 lines) -> Read + Edit is fine
5. Am I modifying CRITICAL DATA? -> bash + log file
6. Am I modifying a LARGE data file? -> bash commands (99%+ savings)
7. Am I copying/merging files? -> cp/cat, not Read/Write
8. Can I check metadata first? (file size, line count)
9. Can I filter before reading? (grep, head, tail)
10. Can I read just the structure? (first 50 lines, function names)
11. Can I summarize instead of showing raw data?
12. Does the user really need the full content?

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Cost Impact

Approach	Tokens/Week	Notes
Wasteful (Read/Edit/Write everything)	500K	Reading files unnecessarily
Moderate (filtered reads only)	200K	Grep/head/tail usage
Efficient (bash commands + filters)	30-50K	Using cp/sed/awk instead of Read

Applying these rules reduces costs by 90-95% on average.

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Implementation

This skill automatically applies these optimizations when:

• Reading log files
• Executing commands with large output
• Navigating codebases
• Debugging errors
• Checking system status

You can always override by saying:

• "Show me the full output"
• "Read the entire file"
• "I want verbose mode"
• "Don't worry about tokens"

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Supporting Files

File	Content	When to load
strategies.md	Detailed bash command strategies, file operation patterns, sed/awk examples, Jupyter notebook manipulation, safe glob patterns, macOS/Linux compatibility	When implementing specific file operations or need detailed bash patterns
learning-mode.md	Strategic file selection, targeted pattern learning workflows, broad repository exploration strategies, repository type identification	When entering learning mode or exploring a new codebase
examples.md	Extensive token savings examples with before/after comparisons, targeted learning examples (Galaxy wrappers, API patterns), cost calculations	When demonstrating token savings or learning from examples
project-patterns.md	Analysis file organization, task management with TodoWrite, background process management, repository organization, MANIFEST system, efficient file operations	When organizing projects, managing long-running tasks, or setting up navigation patterns

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Summary

Core motto: Right model. Right tool. Filter first. Read selectively. Summarize intelligently.

Model selection (highest impact):

• Use Opus for learning/understanding (one-time investment)
• Use Sonnet for development/debugging/implementation (default)

Tool selection (primary optimization):

• Creating NEW files -> Write tool directly
• LOW-COST operations (< 100 lines) -> Claude context directly
• Modifying CODE files -> Read + Edit (always)
• Modifying SMALL data files (< 100 lines) -> Read + Edit is fine
• Modifying LARGE data files -> bash commands (sed, awk, grep)
• Modifying CRITICAL DATA -> bash commands + log file
• Complex edits -> Read + Edit tools

Secondary rules:

• Filter before reading (grep, head, tail)
• Read with limits when needed
• Summarize instead of showing raw output
• Use quiet modes for commands
• Strategic file selection for learning

By following these guidelines, users can get 5-10x more value from their Claude subscription while maintaining high-quality assistance.