skills/htlin222/dotfiles/strobe-check

strobe-check

SKILL.md

STROBE Compliance Checker

Audit observational study manuscripts against the STROBE (Strengthening the Reporting of Observational Studies in Epidemiology) 22-item checklist.

Workflow

  1. Read the full manuscript
  2. Identify the study design: cohort, case-control, or cross-sectional
  3. Walk through each item below, noting design-specific sub-items
  4. For each item, assign: Reported / Partial / Missing / N/A
  5. Quote the relevant manuscript text (with line/page reference) as evidence
  6. Output a compliance summary table + actionable fixes for Missing/Partial items

STROBE Checklist (22 Items)

Title and Abstract

# Topic Requirement
1a Title Indicate the study design with a commonly used term in the title or abstract
1b Abstract Provide an informative and balanced summary of what was done and found

Introduction

# Topic Requirement
2 Background/rationale Explain the scientific background and rationale for the investigation
3 Objectives State specific objectives, including any prespecified hypotheses

Methods

# Topic Requirement
4 Study design Present key elements of study design early in the paper
5 Setting Describe setting, locations, relevant dates (recruitment, exposure, follow-up, data collection)
6a Participants Cohort: eligibility criteria, sources/methods of selection, methods of follow-up. Case-control: eligibility, case ascertainment, control selection, rationale. Cross-sectional: eligibility, sources/methods of selection
6b Participants Cohort/Case-control: For matched studies, give matching criteria and number matched
7 Variables Clearly define all outcomes, exposures, predictors, confounders, effect modifiers; give diagnostic criteria
8 Data sources For each variable, give sources of data and methods of assessment; describe comparability across groups
9 Bias Describe any efforts to address potential sources of bias
10 Study size Explain how the study size was arrived at
11 Quantitative variables Explain how quantitative variables were handled; describe groupings and rationale
12a Statistical methods Describe all statistical methods, including confounding control
12b Statistical methods Methods for subgroups and interactions
12c Statistical methods How missing data were addressed
12d Statistical methods Cohort: how loss to follow-up was addressed. Case-control: how matching was addressed. Cross-sectional: sampling strategy methods
12e Statistical methods Describe any sensitivity analyses

Results

# Topic Requirement
13a Participants Report numbers at each stage of study (eligible, examined, confirmed, included, completed, analysed)
13b Participants Give reasons for non-participation at each stage
13c Participants Consider use of a flow diagram
14a Descriptive data Characteristics of participants (demographic, clinical, social) and information on exposures/confounders
14b Descriptive data Number of participants with missing data for each variable
14c Descriptive data Cohort: Summarise follow-up time (average and total)
15 Outcome data Cohort: numbers of outcome events or summary measures over time. Case-control: numbers in each exposure category. Cross-sectional: numbers of outcome events or summary measures
16a Main results Unadjusted estimates and confounder-adjusted estimates with precision (95% CI). State which confounders and why
16b Main results Report category boundaries when continuous variables were categorised
16c Main results If relevant, translate relative risk into absolute risk for a meaningful time period
17 Other analyses Report subgroup analyses, interactions, sensitivity analyses

Discussion

# Topic Requirement
18 Key results Summarise key results with reference to study objectives
19 Limitations Discuss limitations: sources of bias/imprecision, direction and magnitude of potential bias
20 Interpretation Cautious overall interpretation considering objectives, limitations, multiplicity, similar studies
21 Generalisability Discuss external validity of results

Other Information

# Topic Requirement
22 Funding Source of funding and role of funders

Design-Specific Attention

Design Extra Focus
Cohort Items 6b, 12d (follow-up), 14c (follow-up time), 15 (events over time)
Case-control Items 6a-6b (case/control selection rationale, matching), 12d (matching analysis), 15 (exposure categories)
Cross-sectional Items 6a (selection), 12d (sampling strategy), 15 (summary measures)

Common STROBE Gaps

Frequently Missing Fix
Item 9 (Bias) Add a dedicated paragraph on bias sources and mitigation strategies
Item 10 (Study size) State sample size justification or explain it was convenience-based
Item 12c (Missing data) Describe complete-case, imputation, or sensitivity approach
Item 14b (Missing data counts) Add missingness counts per variable to Table 1 or supplement
Item 16a (Unadjusted + adjusted) Report both crude and adjusted estimates with 95% CIs
Item 19 (Limitations direction) Discuss direction of bias (toward/away from null), not just list weaknesses

Output Format

STROBE Compliance Report
Study design: [Cohort / Case-control / Cross-sectional]
Manuscript: [filename]

Summary: X/22 Reported | Y Partial | Z Missing | W N/A

MISSING ITEMS (priority fixes):
  [Item #] [Topic] — [What's needed]

PARTIAL ITEMS (improvements needed):
  [Item #] [Topic] — [What's present] → [What's missing]

FULLY REPORTED:
  [Item #] [Topic] ✓

Extensions

  • STROBE-Equity (2024): 10 additional items for reporting health equity data. Use alongside core STROBE when the study addresses health disparities.
  • RECORD (REporting of studies Conducted using Observational Routinely-collected Data): Extension for electronic health record / claims database studies.

Related Skills

  • /manuscript — Overall manuscript writing and anti-pattern scanning
  • /human-write — AI-flavored vocabulary detection
Weekly Installs
16
GitHub Stars
75
First Seen
Feb 23, 2026
Installed on
gemini-cli15
github-copilot15
codex15
amp15
cline15
kimi-cli15